Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AC004987.2-201ENST00000395959 1148 ntBASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 MIR1908-201ENST00000410394 80 ntBASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 RPL13P2-201ENST00000440687 659 ntBASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 MIR6869-201ENST00000619434 62 ntBASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNKSR3Q6P9H4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 AC099336.1-201ENST00000417053 1171 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 EEF1DP4-201ENST00000446006 880 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 AL355994.2-201ENST00000447882 704 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 BRI3BPP1-201ENST00000594224 787 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 MIR6787-201ENST00000616675 61 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 TUBB1P2-201ENST00000422712 1306 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 TUBB1P1-201ENST00000503144 1300 ntBASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNKSR3Q6P9H4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms