Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 MIR769-201ENST00000390225 118 ntBASIC13.99□□□□□ -0.17
LRRK2Q5S007 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 AC138649.2-201ENST00000615886 705 ntBASIC13.99□□□□□ -0.17
LRRK2Q5S007 CU633904.3-201ENST00000624042 1029 ntBASIC13.99□□□□□ -0.17
LRRK2Q5S007 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LRRK2Q5S007 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRK2Q5S007 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AC044849.1-201ENST00000519737 1188 ntBASIC13.98□□□□□ -0.17
LRRK2Q5S007 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AC011491.1-203ENST00000637688 543 ntBASIC13.98□□□□□ -0.17
LRRK2Q5S007 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 MIR1202-201ENST00000408529 83 ntBASIC13.98□□□□□ -0.17
LRRK2Q5S007 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 AL645939.5-201ENST00000606834 243 ntBASIC13.98□□□□□ -0.17
LRRK2Q5S007 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LRRK2Q5S007 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRK2Q5S007 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 AC138028.4-201ENST00000564984 1845 ntBASIC13.97□□□□□ -0.17
LRRK2Q5S007 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 AC006480.2-201ENST00000609770 1337 ntBASIC13.97□□□□□ -0.17
LRRK2Q5S007 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 RPL13AP19-201ENST00000434320 584 ntBASIC13.97□□□□□ -0.17
LRRK2Q5S007 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 AC135983.4-201ENST00000564116 1262 ntBASIC13.97□□□□□ -0.17
LRRK2Q5S007 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRK2Q5S007 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms