Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 PRYP6-201ENST00000514804 343 ntBASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 LINC02199-201ENST00000506655 2702 ntBASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.47■□□□□ 0.39
CTC1Q2NKJ3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 AL079307.3-201ENST00000556114 283 ntBASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 AC105021.1-202ENST00000570572 669 ntBASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CYP2A7P1-201ENST00000595391 815 ntBASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTC1Q2NKJ3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CTC1Q2NKJ3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTC1Q2NKJ3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CTC1Q2NKJ3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTC1Q2NKJ3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.46■□□□□ 0.38
CTC1Q2NKJ3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 BCL2-203ENST00000589955 5011 ntBASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTC1Q2NKJ3 SPDYE19P-201ENST00000338590 713 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms