Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 DOC2GP-202ENST00000514950 1163 ntBASIC19.47■□□□□ 0.71
PDS5AQ29RF7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 AC099568.2-201ENST00000609194 695 ntBASIC19.47■□□□□ 0.71
PDS5AQ29RF7 AL109936.8-201ENST00000641772 604 ntBASIC19.47■□□□□ 0.71
PDS5AQ29RF7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 AP001282.1-201ENST00000531301 1499 ntBASIC19.46■□□□□ 0.71
PDS5AQ29RF7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 AD000864.1-201ENST00000624076 2295 ntBASIC19.46■□□□□ 0.71
PDS5AQ29RF7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 GAPDHP21-201ENST00000450301 1010 ntBASIC19.46■□□□□ 0.71
PDS5AQ29RF7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 AC140912.1-201ENST00000577171 1054 ntBASIC19.46■□□□□ 0.71
PDS5AQ29RF7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.46■□□□□ 0.71
PDS5AQ29RF7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDS5AQ29RF7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 KRT8P37-201ENST00000451609 1420 ntBASIC19.45■□□□□ 0.7
PDS5AQ29RF7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 AC239800.4-201ENST00000603712 296 ntBASIC19.45■□□□□ 0.7
PDS5AQ29RF7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms