Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.03■□□□□ 0.8
SCN7AQ01118 BCYRN1-201ENST00000418539 200 ntBASIC20.03■□□□□ 0.8
SCN7AQ01118 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.03■□□□□ 0.8
SCN7AQ01118 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.03■□□□□ 0.8
SCN7AQ01118 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.03■□□□□ 0.8
SCN7AQ01118 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 AP001889.1-201ENST00000525414 633 ntBASIC20.03■□□□□ 0.8
SCN7AQ01118 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 MIR6787-201ENST00000616675 61 ntBASIC20.03■□□□□ 0.8
SCN7AQ01118 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCN7AQ01118 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SCN7AQ01118 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 AP001094.4-201ENST00000579008 2176 ntBASIC20.03■□□□□ 0.8
SCN7AQ01118 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN7AQ01118 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 AP001282.1-201ENST00000531301 1499 ntBASIC20.02■□□□□ 0.8
SCN7AQ01118 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN7AQ01118 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN7AQ01118 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.02■□□□□ 0.8
SCN7AQ01118 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.02■□□□□ 0.8
SCN7AQ01118 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN7AQ01118 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN7AQ01118 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SCN7AQ01118 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.02■□□□□ 0.79
SCN7AQ01118 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SCN7AQ01118 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.02■□□□□ 0.79
SCN7AQ01118 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SCN7AQ01118 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.02■□□□□ 0.79
SCN7AQ01118 RNF216P1-203ENST00000404404 2427 ntBASIC20.01■□□□□ 0.79
SCN7AQ01118 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN7AQ01118 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN7AQ01118 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCN7AQ01118 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCN7AQ01118 AC134915.1-201ENST00000426461 574 ntBASIC20.01■□□□□ 0.79
SCN7AQ01118 ACTBP11-201ENST00000436287 1126 ntBASIC20.01■□□□□ 0.79
SCN7AQ01118 RPL13AP25-201ENST00000484130 612 ntBASIC20.01■□□□□ 0.79
SCN7AQ01118 ZNF767P-206ENST00000513792 565 ntBASIC20.01■□□□□ 0.79
SCN7AQ01118 AP000812.2-201ENST00000538934 718 ntBASIC20.01■□□□□ 0.79
SCN7AQ01118 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN7AQ01118 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.01■□□□□ 0.79
SCN7AQ01118 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN7AQ01118 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
SCN7AQ01118 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN7AQ01118 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN7AQ01118 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN7AQ01118 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN7AQ01118 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN7AQ01118 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN7AQ01118 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN7AQ01118 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN7AQ01118 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SCN7AQ01118 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 MIR1247-201ENST00000408206 136 ntBASIC20■□□□□ 0.79
SCN7AQ01118 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20■□□□□ 0.79
SCN7AQ01118 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20■□□□□ 0.79
SCN7AQ01118 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20■□□□□ 0.79
SCN7AQ01118 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20■□□□□ 0.79
SCN7AQ01118 CLUHP6-201ENST00000580789 941 ntBASIC20■□□□□ 0.79
SCN7AQ01118 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20■□□□□ 0.79
SCN7AQ01118 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20■□□□□ 0.79
SCN7AQ01118 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20■□□□□ 0.79
SCN7AQ01118 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20■□□□□ 0.79
SCN7AQ01118 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20■□□□□ 0.79
SCN7AQ01118 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20■□□□□ 0.79
SCN7AQ01118 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SCN7AQ01118 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms