Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP1P78357 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP1P78357 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP1P78357 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 NUS1P3-201ENST00000423502 862 ntBASIC19.26■□□□□ 0.67
CNTNAP1P78357 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 AP001889.1-201ENST00000525414 633 ntBASIC19.26■□□□□ 0.67
CNTNAP1P78357 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP1P78357 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.26■□□□□ 0.67
CNTNAP1P78357 MIR6069-201ENST00000620069 79 ntBASIC19.26■□□□□ 0.67
CNTNAP1P78357 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP1P78357 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP1P78357 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP1P78357 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP1P78357 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 AP001258.2-201ENST00000529891 490 ntBASIC19.25■□□□□ 0.67
CNTNAP1P78357 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 RN7SL560P-201ENST00000577943 264 ntBASIC19.25■□□□□ 0.67
CNTNAP1P78357 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 AC025048.3-201ENST00000590609 569 ntBASIC19.25■□□□□ 0.67
CNTNAP1P78357 AC005702.4-201ENST00000618393 416 ntBASIC19.25■□□□□ 0.67
CNTNAP1P78357 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 AL136982.4-201ENST00000437689 1740 ntBASIC19.25■□□□□ 0.67
CNTNAP1P78357 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP1P78357 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP1P78357 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 ACTG1P3-201ENST00000431775 1114 ntBASIC19.24■□□□□ 0.67
CNTNAP1P78357 AL162726.2-201ENST00000438986 1017 ntBASIC19.24■□□□□ 0.67
CNTNAP1P78357 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP1P78357 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP1P78357 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP1P78357 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP1P78357 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP1P78357 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP1P78357 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP1P78357 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CNTNAP1P78357 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP1P78357 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP1P78357 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms