Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 LINC02560-201ENST00000596379 459 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 AL365330.1-201ENST00000607459 531 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 AL133215.2-201ENST00000609242 977 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 AC009118.2-201ENST00000613275 655 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
EPHA4P54764 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
EPHA4P54764 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
EPHA4P54764 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
EPHA4P54764 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
EPHA4P54764 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
EPHA4P54764 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 AL162727.3-201ENST00000635661 2787 ntBASIC15.75■□□□□ 0.11
EPHA4P54764 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.75■□□□□ 0.11
EPHA4P54764 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA4P54764 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
EPHA4P54764 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA4P54764 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHA4P54764 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
EPHA4P54764 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 U82695.1-201ENST00000635752 1889 ntBASIC15.74■□□□□ 0.11
EPHA4P54764 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
EPHA4P54764 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
EPHA4P54764 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
EPHA4P54764 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHA4P54764 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
EPHA4P54764 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHA4P54764 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA4P54764 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHA4P54764 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA4P54764 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.73■□□□□ 0.11
EPHA4P54764 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA4P54764 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHA4P54764 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA4P54764 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
EPHA4P54764 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHA4P54764 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
EPHA4P54764 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 MIR661-201ENST00000384842 89 ntBASIC15.73■□□□□ 0.11
EPHA4P54764 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHA4P54764 RPL37AP1-201ENST00000412502 279 ntBASIC15.73■□□□□ 0.11
EPHA4P54764 MRPS18AP1-201ENST00000414458 589 ntBASIC15.73■□□□□ 0.11
EPHA4P54764 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHA4P54764 AL080243.2-201ENST00000418783 582 ntBASIC15.73■□□□□ 0.11
EPHA4P54764 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA4P54764 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 AC009477.1-201ENST00000452936 217 ntBASIC15.73■□□□□ 0.11
EPHA4P54764 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHA4P54764 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA4P54764 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHA4P54764 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA4P54764 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
EPHA4P54764 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA4P54764 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
EPHA4P54764 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms