Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RNF144AP50876 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
RNF144AP50876 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF144AP50876 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF144AP50876 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF144AP50876 AC140113.2-201ENST00000604370 208 ntBASIC15.31■□□□□ 0.04
RNF144AP50876 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF144AP50876 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 AC004877.2-201ENST00000623941 599 ntBASIC15.31■□□□□ 0.04
RNF144AP50876 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF144AP50876 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 ME2P1-201ENST00000426028 1970 ntBASIC15.31■□□□□ 0.04
RNF144AP50876 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF144AP50876 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF144AP50876 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF144AP50876 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF144AP50876 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF144AP50876 HCG4-201ENST00000418983 998 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 MED15P5-201ENST00000423150 992 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF144AP50876 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF144AP50876 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF144AP50876 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF144AP50876 AC145285.3-201ENST00000564603 959 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 MIR4515-201ENST00000584082 81 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF144AP50876 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF144AP50876 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF144AP50876 AC007950.2-201ENST00000615045 2347 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 BX640515.1-201ENST00000617215 977 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 AC092865.6-201ENST00000642101 219 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF144AP50876 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.3■□□□□ 0.04
RNF144AP50876 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF144AP50876 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF144AP50876 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF144AP50876 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
RNF144AP50876 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF144AP50876 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF144AP50876 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF144AP50876 GPAA1P2-202ENST00000606848 1787 ntBASIC15.29■□□□□ 0.04
RNF144AP50876 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF144AP50876 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF144AP50876 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RNF144AP50876 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF144AP50876 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.29■□□□□ 0.04
RNF144AP50876 AC023274.1-201ENST00000418278 595 ntBASIC15.29■□□□□ 0.04
RNF144AP50876 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 AP000347.1-202ENST00000435868 847 ntBASIC15.29■□□□□ 0.04
RNF144AP50876 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms