Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.37■□□□□ 0.53
TM4SF4P48230 AC104982.3-201ENST00000581995 514 ntBASIC18.37■□□□□ 0.53
TM4SF4P48230 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.37■□□□□ 0.53
TM4SF4P48230 SPCS2P2-201ENST00000603270 608 ntBASIC18.37■□□□□ 0.53
TM4SF4P48230 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.37■□□□□ 0.53
TM4SF4P48230 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.37■□□□□ 0.53
TM4SF4P48230 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TM4SF4P48230 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
TM4SF4P48230 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.36■□□□□ 0.53
TM4SF4P48230 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 AHCYP2-201ENST00000430630 1300 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.36■□□□□ 0.53
TM4SF4P48230 LDHBP1-201ENST00000455730 1119 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 RPS2P36-201ENST00000456516 831 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.36■□□□□ 0.53
TM4SF4P48230 RPSAP36-202ENST00000494591 1261 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TM4SF4P48230 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.36■□□□□ 0.53
TM4SF4P48230 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM4SF4P48230 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 AC078819.1-201ENST00000547454 765 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 AC012085.1-201ENST00000548270 765 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.36■□□□□ 0.53
TM4SF4P48230 MIR4741-201ENST00000579822 90 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.36■□□□□ 0.53
TM4SF4P48230 REXO1L8P-201ENST00000604378 1897 ntBASIC18.36■□□□□ 0.53
TM4SF4P48230 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.36■□□□□ 0.53
TM4SF4P48230 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM4SF4P48230 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF4P48230 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM4SF4P48230 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF4P48230 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF4P48230 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TM4SF4P48230 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.35■□□□□ 0.53
TM4SF4P48230 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
TM4SF4P48230 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.35■□□□□ 0.53
TM4SF4P48230 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 HOMER2P2-201ENST00000451621 847 ntBASIC18.35■□□□□ 0.53
TM4SF4P48230 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
TM4SF4P48230 AC138627.1-207ENST00000641560 1006 ntBASIC18.35■□□□□ 0.53
TM4SF4P48230 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF4P48230 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF4P48230 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.35■□□□□ 0.53
TM4SF4P48230 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
TM4SF4P48230 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
TM4SF4P48230 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF4P48230 PCGF3-213ENST00000620529 1899 ntBASIC18.35■□□□□ 0.53
TM4SF4P48230 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF4P48230 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms