Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNA3P32297 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNA3P32297 PAWRP1-201ENST00000451083 565 ntBASIC17.33■□□□□ 0.36
CHRNA3P32297 POU5F1P6-201ENST00000466990 990 ntBASIC17.33■□□□□ 0.36
CHRNA3P32297 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CHRNA3P32297 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNA3P32297 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNA3P32297 AC018845.2-201ENST00000568326 409 ntBASIC17.33■□□□□ 0.36
CHRNA3P32297 AC002347.1-201ENST00000569543 541 ntBASIC17.33■□□□□ 0.36
CHRNA3P32297 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNA3P32297 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNA3P32297 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.33■□□□□ 0.36
CHRNA3P32297 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CHRNA3P32297 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNA3P32297 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRNA3P32297 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 AC103702.1-201ENST00000548801 2630 ntBASIC17.33■□□□□ 0.36
CHRNA3P32297 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 YBX2P1-201ENST00000394192 760 ntBASIC17.32■□□□□ 0.36
CHRNA3P32297 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.32■□□□□ 0.36
CHRNA3P32297 IGLL3P-201ENST00000412472 434 ntBASIC17.32■□□□□ 0.36
CHRNA3P32297 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.32■□□□□ 0.36
CHRNA3P32297 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 AC004832.2-201ENST00000426397 482 ntBASIC17.32■□□□□ 0.36
CHRNA3P32297 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA3P32297 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA3P32297 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA3P32297 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA3P32297 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.31■□□□□ 0.36
CHRNA3P32297 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 LINC01144-201ENST00000626198 1710 ntBASIC17.31■□□□□ 0.36
CHRNA3P32297 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA3P32297 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.31■□□□□ 0.36
CHRNA3P32297 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA3P32297 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA3P32297 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA3P32297 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA3P32297 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA3P32297 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms