Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.98■□□□□ 0.15
HOXA6P31267 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.98■□□□□ 0.15
HOXA6P31267 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.98■□□□□ 0.15
HOXA6P31267 DUX4L45-201ENST00000566406 1057 ntBASIC15.98■□□□□ 0.15
HOXA6P31267 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.98■□□□□ 0.15
HOXA6P31267 AC067852.2-201ENST00000590513 2313 ntBASIC15.98■□□□□ 0.15
HOXA6P31267 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.98■□□□□ 0.15
HOXA6P31267 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.98■□□□□ 0.15
HOXA6P31267 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.98■□□□□ 0.15
HOXA6P31267 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HOXA6P31267 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.98■□□□□ 0.15
HOXA6P31267 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HOXA6P31267 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.98■□□□□ 0.15
HOXA6P31267 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HOXA6P31267 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HOXA6P31267 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.98■□□□□ 0.15
HOXA6P31267 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HOXA6P31267 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HOXA6P31267 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.97■□□□□ 0.15
HOXA6P31267 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.97■□□□□ 0.15
HOXA6P31267 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 AC134043.2-201ENST00000624206 2238 ntBASIC15.97■□□□□ 0.15
HOXA6P31267 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 AC016694.1-201ENST00000434179 700 ntBASIC15.97■□□□□ 0.15
HOXA6P31267 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HOXA6P31267 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HOXA6P31267 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HOXA6P31267 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.97■□□□□ 0.15
HOXA6P31267 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HOXA6P31267 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
HOXA6P31267 INTS4P2-202ENST00000614726 2019 ntBASIC15.97■□□□□ 0.15
HOXA6P31267 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.97■□□□□ 0.15
HOXA6P31267 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HOXA6P31267 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.97■□□□□ 0.15
HOXA6P31267 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HOXA6P31267 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HOXA6P31267 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.96■□□□□ 0.15
HOXA6P31267 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.96■□□□□ 0.15
HOXA6P31267 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HOXA6P31267 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.96■□□□□ 0.15
HOXA6P31267 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.96■□□□□ 0.15
HOXA6P31267 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 MIR1247-201ENST00000408206 136 ntBASIC15.96■□□□□ 0.15
HOXA6P31267 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HOXA6P31267 AC012441.1-201ENST00000446669 685 ntBASIC15.96■□□□□ 0.15
HOXA6P31267 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.96■□□□□ 0.15
HOXA6P31267 KRT8P13-201ENST00000463294 1010 ntBASIC15.96■□□□□ 0.15
HOXA6P31267 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HOXA6P31267 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.96■□□□□ 0.15
HOXA6P31267 AC243562.2-201ENST00000561247 970 ntBASIC15.96■□□□□ 0.15
HOXA6P31267 AP001063.1-201ENST00000568332 529 ntBASIC15.96■□□□□ 0.15
HOXA6P31267 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
HOXA6P31267 MIR3615-201ENST00000581999 87 ntBASIC15.96■□□□□ 0.15
HOXA6P31267 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.96■□□□□ 0.15
HOXA6P31267 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.96■□□□□ 0.15
HOXA6P31267 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
HOXA6P31267 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.96■□□□□ 0.15
HOXA6P31267 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HOXA6P31267 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HOXA6P31267 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HOXA6P31267 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HOXA6P31267 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
HOXA6P31267 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HOXA6P31267 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.96■□□□□ 0.14
HOXA6P31267 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HOXA6P31267 BCL2-203ENST00000589955 5011 ntBASIC15.95■□□□□ 0.14
HOXA6P31267 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
HOXA6P31267 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.95■□□□□ 0.14
HOXA6P31267 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.95■□□□□ 0.14
HOXA6P31267 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HOXA6P31267 KRT8P37-201ENST00000451609 1420 ntBASIC15.95■□□□□ 0.14
HOXA6P31267 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms