Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 TSSK5P-201ENST00000423978 907 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AC009118.2-201ENST00000613275 655 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AF228730.6-201ENST00000641497 218 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AC084121.3-201ENST00000641716 218 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AC105233.6-201ENST00000642093 218 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PCDHB17P-201ENST00000539533 2393 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PCDHB19P-201ENST00000570871 2371 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 AC105020.1-201ENST00000435356 2205 ntBASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 AC015922.1-201ENST00000421102 1152 ntBASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 RNA5SP410-201ENST00000516285 106 ntBASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 CETN4P-206ENST00000642099 2168 ntBASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAB40ALP0C0E4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 AC022144.1-201ENST00000602255 1580 ntBASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms