Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CYP3A4P08684 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CYP3A4P08684 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 AC100757.3-201ENST00000622361 1406 ntBASIC18.32■□□□□ 0.52
CYP3A4P08684 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.31■□□□□ 0.52
CYP3A4P08684 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.31■□□□□ 0.52
CYP3A4P08684 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.31■□□□□ 0.52
CYP3A4P08684 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CYP3A4P08684 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CYP3A4P08684 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.31■□□□□ 0.52
CYP3A4P08684 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 BASP1P1-201ENST00000430708 665 ntBASIC18.31■□□□□ 0.52
CYP3A4P08684 AC241585.1-201ENST00000433527 519 ntBASIC18.31■□□□□ 0.52
CYP3A4P08684 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.31■□□□□ 0.52
CYP3A4P08684 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.31■□□□□ 0.52
CYP3A4P08684 RNA5SP421-201ENST00000516864 134 ntBASIC18.31■□□□□ 0.52
CYP3A4P08684 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CYP3A4P08684 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.31■□□□□ 0.52
CYP3A4P08684 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CYP3A4P08684 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYP3A4P08684 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 AC006449.5-201ENST00000610658 2098 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CYP3A4P08684 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CYP3A4P08684 AC092364.2-201ENST00000596710 2692 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.3■□□□□ 0.52
CYP3A4P08684 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CYP3A4P08684 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.3■□□□□ 0.52
CYP3A4P08684 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.3■□□□□ 0.52
CYP3A4P08684 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.3■□□□□ 0.52
CYP3A4P08684 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CYP3A4P08684 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.3■□□□□ 0.52
CYP3A4P08684 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CYP3A4P08684 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.3■□□□□ 0.52
CYP3A4P08684 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.3■□□□□ 0.52
CYP3A4P08684 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 AC099398.1-201ENST00000567919 2776 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 MIR648-201ENST00000385046 94 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 AC004987.2-201ENST00000395959 1148 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.3■□□□□ 0.52
CYP3A4P08684 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.3■□□□□ 0.52
CYP3A4P08684 EEF1DP4-201ENST00000446006 880 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 AC093214.1-201ENST00000511688 1107 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 SPCS2P1-201ENST00000561636 679 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.3■□□□□ 0.52
CYP3A4P08684 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.3■□□□□ 0.52
CYP3A4P08684 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.3■□□□□ 0.52
CYP3A4P08684 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 AL096865.1-201ENST00000606796 927 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 AL118508.1-201ENST00000613502 2345 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.3■□□□□ 0.52
CYP3A4P08684 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.3■□□□□ 0.52
CYP3A4P08684 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 AL596087.1-201ENST00000400979 1969 ntBASIC18.3■□□□□ 0.52
CYP3A4P08684 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYP3A4P08684 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CYP3A4P08684 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CYP3A4P08684 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CYP3A4P08684 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CYP3A4P08684 AC087499.5-201ENST00000452760 1342 ntBASIC18.29■□□□□ 0.52
CYP3A4P08684 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CYP3A4P08684 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CYP3A4P08684 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.29■□□□□ 0.52
CYP3A4P08684 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CYP3A4P08684 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.29■□□□□ 0.52
CYP3A4P08684 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.29■□□□□ 0.52
CYP3A4P08684 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CYP3A4P08684 HAUS4P1-201ENST00000406739 1145 ntBASIC18.29■□□□□ 0.52
CYP3A4P08684 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.29■□□□□ 0.52
CYP3A4P08684 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms