Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR6787-201ENST00000616675 61 ntBASIC17.2■□□□□ 0.34
RB1P06400 RPSAP52-203ENST00000622976 1023 ntBASIC17.2■□□□□ 0.34
RB1P06400 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RB1P06400 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.2■□□□□ 0.34
RB1P06400 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.2■□□□□ 0.34
RB1P06400 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.2■□□□□ 0.34
RB1P06400 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.2■□□□□ 0.34
RB1P06400 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RB1P06400 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RB1P06400 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
RB1P06400 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RB1P06400 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RB1P06400 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 TUBB1P2-201ENST00000422712 1306 ntBASIC17.2■□□□□ 0.34
RB1P06400 TUBB1P1-201ENST00000503144 1300 ntBASIC17.2■□□□□ 0.34
RB1P06400 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 CYP4F24P-201ENST00000586049 1580 ntBASIC17.19■□□□□ 0.34
RB1P06400 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RB1P06400 CROCCP2-202ENST00000412962 2773 ntBASIC17.19■□□□□ 0.34
RB1P06400 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RB1P06400 AL031731.1-201ENST00000642131 2094 ntBASIC17.19■□□□□ 0.34
RB1P06400 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
RB1P06400 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.19■□□□□ 0.34
RB1P06400 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RB1P06400 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.19■□□□□ 0.34
RB1P06400 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.19■□□□□ 0.34
RB1P06400 CTBP2P5-201ENST00000454986 1264 ntBASIC17.19■□□□□ 0.34
RB1P06400 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.19■□□□□ 0.34
RB1P06400 RNA5SP412-201ENST00000516234 123 ntBASIC17.19■□□□□ 0.34
RB1P06400 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.19■□□□□ 0.34
RB1P06400 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.19■□□□□ 0.34
RB1P06400 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.19■□□□□ 0.34
RB1P06400 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.19■□□□□ 0.34
RB1P06400 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.19■□□□□ 0.34
RB1P06400 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RB1P06400 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RB1P06400 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RB1P06400 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RB1P06400 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 AC026471.1-201ENST00000564629 3026 ntBASIC17.18■□□□□ 0.34
RB1P06400 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.18■□□□□ 0.34
RB1P06400 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RB1P06400 PDIA3P1-201ENST00000471856 1510 ntBASIC17.18■□□□□ 0.34
RB1P06400 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.18■□□□□ 0.34
RB1P06400 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.18■□□□□ 0.34
RB1P06400 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 MIR1908-201ENST00000410394 80 ntBASIC17.18■□□□□ 0.34
RB1P06400 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.18■□□□□ 0.34
RB1P06400 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.18■□□□□ 0.34
RB1P06400 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.18■□□□□ 0.34
RB1P06400 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.18■□□□□ 0.34
RB1P06400 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RB1P06400 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RB1P06400 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RB1P06400 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
RB1P06400 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.18■□□□□ 0.34
RB1P06400 AL391069.4-201ENST00000609583 481 ntBASIC17.18■□□□□ 0.34
RB1P06400 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.18■□□□□ 0.34
RB1P06400 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.18■□□□□ 0.34
RB1P06400 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RB1P06400 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RB1P06400 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.18■□□□□ 0.34
RB1P06400 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms