Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DRAP01903 UXT-AS1-201ENST00000590504 1525 ntBASIC17.62■□□□□ 0.41
HLA-DRAP01903 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DRAP01903 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.62■□□□□ 0.41
HLA-DRAP01903 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 MIR1233-2-201ENST00000408138 82 ntBASIC17.61■□□□□ 0.41
HLA-DRAP01903 MIR1233-1-201ENST00000408722 82 ntBASIC17.61■□□□□ 0.41
HLA-DRAP01903 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 AP000344.2-201ENST00000512987 629 ntBASIC17.61■□□□□ 0.41
HLA-DRAP01903 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 AC093520.2-201ENST00000561830 333 ntBASIC17.61■□□□□ 0.41
HLA-DRAP01903 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DRAP01903 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DRAP01903 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 AC005237.2-201ENST00000434368 219 ntBASIC17.6■□□□□ 0.41
HLA-DRAP01903 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 AC004967.1-201ENST00000453589 447 ntBASIC17.6■□□□□ 0.41
HLA-DRAP01903 AC098859.1-201ENST00000502915 1238 ntBASIC17.6■□□□□ 0.41
HLA-DRAP01903 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 SLC25A39P2-201ENST00000537614 270 ntBASIC17.6■□□□□ 0.41
HLA-DRAP01903 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DRAP01903 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DRAP01903 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 AL627223.1-201ENST00000416693 442 ntBASIC17.59■□□□□ 0.41
HLA-DRAP01903 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 AP006288.1-201ENST00000446065 395 ntBASIC17.59■□□□□ 0.41
HLA-DRAP01903 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DRAP01903 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DRAP01903 AC084121.4-201ENST00000641598 221 ntBASIC17.59■□□□□ 0.41
HLA-DRAP01903 AF228730.8-201ENST00000642140 221 ntBASIC17.59■□□□□ 0.41
HLA-DRAP01903 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms