Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-CO1P00395 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
MT-CO1P00395 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.83■□□□□ 0.28
MT-CO1P00395 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.83■□□□□ 0.28
MT-CO1P00395 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MT-CO1P00395 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-CO1P00395 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
MT-CO1P00395 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MT-CO1P00395 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.83■□□□□ 0.28
MT-CO1P00395 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-CO1P00395 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.83■□□□□ 0.28
MT-CO1P00395 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-CO1P00395 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 LINC02199-201ENST00000506655 2702 ntBASIC16.82■□□□□ 0.28
MT-CO1P00395 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
MT-CO1P00395 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.82■□□□□ 0.28
MT-CO1P00395 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-CO1P00395 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.82■□□□□ 0.28
MT-CO1P00395 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
MT-CO1P00395 AC004449.1-201ENST00000564240 433 ntBASIC16.82■□□□□ 0.28
MT-CO1P00395 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.82■□□□□ 0.28
MT-CO1P00395 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-CO1P00395 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-CO1P00395 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MT-CO1P00395 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 GPAA1P2-202ENST00000606848 1787 ntBASIC16.82■□□□□ 0.28
MT-CO1P00395 AC073439.1-201ENST00000624121 1774 ntBASIC16.82■□□□□ 0.28
MT-CO1P00395 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-CO1P00395 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MT-CO1P00395 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
MT-CO1P00395 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.81■□□□□ 0.28
MT-CO1P00395 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 CICP6-201ENST00000457191 2729 ntBASIC16.81■□□□□ 0.28
MT-CO1P00395 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MT-CO1P00395 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MT-CO1P00395 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MT-CO1P00395 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.81■□□□□ 0.28
MT-CO1P00395 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.81■□□□□ 0.28
MT-CO1P00395 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 RBPMS2P1-201ENST00000437762 623 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms