Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
OPHN1O60890 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.18■□□□□ 0.34
OPHN1O60890 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.18■□□□□ 0.34
OPHN1O60890 FAM58CP-201ENST00000435741 640 ntBASIC17.18■□□□□ 0.34
OPHN1O60890 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.18■□□□□ 0.34
OPHN1O60890 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.18■□□□□ 0.34
OPHN1O60890 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
OPHN1O60890 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.18■□□□□ 0.34
OPHN1O60890 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.18■□□□□ 0.34
OPHN1O60890 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.18■□□□□ 0.34
OPHN1O60890 AC096734.2-201ENST00000562054 433 ntBASIC17.18■□□□□ 0.34
OPHN1O60890 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.18■□□□□ 0.34
OPHN1O60890 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.18■□□□□ 0.34
OPHN1O60890 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 AC103702.1-201ENST00000548801 2630 ntBASIC17.18■□□□□ 0.34
OPHN1O60890 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.18■□□□□ 0.34
OPHN1O60890 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.18■□□□□ 0.34
OPHN1O60890 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.18■□□□□ 0.34
OPHN1O60890 LINC02199-201ENST00000506655 2702 ntBASIC17.18■□□□□ 0.34
OPHN1O60890 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.17■□□□□ 0.34
OPHN1O60890 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.17■□□□□ 0.34
OPHN1O60890 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.17■□□□□ 0.34
OPHN1O60890 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.17■□□□□ 0.34
OPHN1O60890 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.17■□□□□ 0.34
OPHN1O60890 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.17■□□□□ 0.34
OPHN1O60890 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 KRT19P2-202ENST00000557173 1012 ntBASIC17.17■□□□□ 0.34
OPHN1O60890 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.17■□□□□ 0.34
OPHN1O60890 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.17■□□□□ 0.34
OPHN1O60890 AL096865.1-201ENST00000606796 927 ntBASIC17.17■□□□□ 0.34
OPHN1O60890 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
OPHN1O60890 AC010507.1-201ENST00000633895 436 ntBASIC17.17■□□□□ 0.34
OPHN1O60890 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
OPHN1O60890 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.17■□□□□ 0.34
OPHN1O60890 AC006449.5-201ENST00000610658 2098 ntBASIC17.17■□□□□ 0.34
OPHN1O60890 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPHN1O60890 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.17■□□□□ 0.34
OPHN1O60890 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
OPHN1O60890 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.16■□□□□ 0.34
OPHN1O60890 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.16■□□□□ 0.34
OPHN1O60890 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
OPHN1O60890 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 AC131009.4-201ENST00000624048 1740 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
OPHN1O60890 SNX33P1-201ENST00000592116 1762 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
OPHN1O60890 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
OPHN1O60890 IGLL3P-201ENST00000412472 434 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 AC092474.2-201ENST00000424288 719 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.16■□□□□ 0.34
OPHN1O60890 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.16■□□□□ 0.34
OPHN1O60890 AC107918.2-201ENST00000530817 355 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.16■□□□□ 0.34
OPHN1O60890 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
OPHN1O60890 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 AC004835.2-201ENST00000603762 682 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
OPHN1O60890 AC007064.4-201ENST00000637740 555 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.16■□□□□ 0.34
OPHN1O60890 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
OPHN1O60890 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.16■□□□□ 0.34
OPHN1O60890 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms