Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
NDUFA1O15239 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 KRT8P49-201ENST00000604166 1432 ntBASIC11.28□□□□□ -0.6
NDUFA1O15239 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
NDUFA1O15239 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.28□□□□□ -0.6
NDUFA1O15239 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 DRAXINP1-201ENST00000437611 948 ntBASIC11.28□□□□□ -0.6
NDUFA1O15239 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 KRT17P6-201ENST00000453795 1220 ntBASIC11.28□□□□□ -0.6
NDUFA1O15239 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.28□□□□□ -0.6
NDUFA1O15239 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.28□□□□□ -0.6
NDUFA1O15239 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
NDUFA1O15239 TOB2P1-201ENST00000469761 992 ntBASIC11.28□□□□□ -0.6
NDUFA1O15239 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.28□□□□□ -0.6
NDUFA1O15239 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.28□□□□□ -0.6
NDUFA1O15239 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
NDUFA1O15239 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.28□□□□□ -0.6
NDUFA1O15239 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.28□□□□□ -0.6
NDUFA1O15239 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
NDUFA1O15239 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.28□□□□□ -0.6
NDUFA1O15239 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.28□□□□□ -0.6
NDUFA1O15239 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
NDUFA1O15239 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 AC112504.1-201ENST00000623415 1841 ntBASIC11.28□□□□□ -0.6
NDUFA1O15239 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 AC016734.2-201ENST00000624325 1377 ntBASIC11.28□□□□□ -0.6
NDUFA1O15239 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.27□□□□□ -0.6
NDUFA1O15239 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
NDUFA1O15239 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.27□□□□□ -0.6
NDUFA1O15239 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NDUFA1O15239 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
NDUFA1O15239 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
NDUFA1O15239 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NDUFA1O15239 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NDUFA1O15239 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.27□□□□□ -0.6
NDUFA1O15239 PCDHA3-202ENST00000532566 4594 ntBASIC11.27□□□□□ -0.6
NDUFA1O15239 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
NDUFA1O15239 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.27□□□□□ -0.6
NDUFA1O15239 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
NDUFA1O15239 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NDUFA1O15239 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NDUFA1O15239 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
NDUFA1O15239 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.27□□□□□ -0.61
NDUFA1O15239 NSUN5P1-202ENST00000421140 1535 ntBASIC11.27□□□□□ -0.61
NDUFA1O15239 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.27□□□□□ -0.61
NDUFA1O15239 NSUN5P2-203ENST00000457352 1529 ntBASIC11.27□□□□□ -0.61
NDUFA1O15239 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
NDUFA1O15239 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
NDUFA1O15239 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.27□□□□□ -0.61
NDUFA1O15239 POM121L3P-201ENST00000419331 1163 ntBASIC11.27□□□□□ -0.61
NDUFA1O15239 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
NDUFA1O15239 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
NDUFA1O15239 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NDUFA1O15239 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.27□□□□□ -0.61
NDUFA1O15239 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.27□□□□□ -0.61
NDUFA1O15239 LINC00265-3P-201ENST00000447588 903 ntBASIC11.27□□□□□ -0.61
NDUFA1O15239 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NDUFA1O15239 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NDUFA1O15239 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.27□□□□□ -0.61
NDUFA1O15239 AC104819.1-201ENST00000504587 486 ntBASIC11.27□□□□□ -0.61
NDUFA1O15239 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NDUFA1O15239 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.27□□□□□ -0.61
NDUFA1O15239 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
NDUFA1O15239 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.27□□□□□ -0.61
NDUFA1O15239 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.27□□□□□ -0.61
NDUFA1O15239 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.27□□□□□ -0.61
NDUFA1O15239 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms