Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DDX39AO00148 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DDX39AO00148 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX39AO00148 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX39AO00148 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 LINC01144-201ENST00000626198 1710 ntBASIC18.41■□□□□ 0.54
DDX39AO00148 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX39AO00148 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DDX39AO00148 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX39AO00148 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX39AO00148 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
DDX39AO00148 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX39AO00148 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX39AO00148 AC140878.1-201ENST00000565277 250 ntBASIC18.41■□□□□ 0.54
DDX39AO00148 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX39AO00148 AL390754.1-201ENST00000619088 582 ntBASIC18.41■□□□□ 0.54
DDX39AO00148 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX39AO00148 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
DDX39AO00148 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX39AO00148 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX39AO00148 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX39AO00148 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.4■□□□□ 0.54
DDX39AO00148 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DDX39AO00148 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX39AO00148 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.4■□□□□ 0.54
DDX39AO00148 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX39AO00148 MTND6P24-201ENST00000440466 518 ntBASIC18.4■□□□□ 0.54
DDX39AO00148 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX39AO00148 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 AC069120.2-201ENST00000524091 540 ntBASIC18.4■□□□□ 0.54
DDX39AO00148 AC011467.4-201ENST00000594891 528 ntBASIC18.4■□□□□ 0.54
DDX39AO00148 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 AC009053.2-201ENST00000563701 2365 ntBASIC18.4■□□□□ 0.54
DDX39AO00148 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DDX39AO00148 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX39AO00148 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DDX39AO00148 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.39■□□□□ 0.54
DDX39AO00148 PCDHA14-201ENST00000506751 2298 ntBASIC18.39■□□□□ 0.54
DDX39AO00148 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
DDX39AO00148 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX39AO00148 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX39AO00148 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms