Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SBNO1A3KN83 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SBNO1A3KN83 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SBNO1A3KN83 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.89■■□□□ 1.09
SBNO1A3KN83 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SBNO1A3KN83 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SBNO1A3KN83 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SBNO1A3KN83 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 BCRP2-202ENST00000447763 634 ntBASIC21.88■■□□□ 1.09
SBNO1A3KN83 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 BCRP6-201ENST00000510112 632 ntBASIC21.88■■□□□ 1.09
SBNO1A3KN83 BCRP7-201ENST00000511549 544 ntBASIC21.88■■□□□ 1.09
SBNO1A3KN83 ZNF767P-206ENST00000513792 565 ntBASIC21.88■■□□□ 1.09
SBNO1A3KN83 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 ENPP7P5-201ENST00000541031 1031 ntBASIC21.88■■□□□ 1.09
SBNO1A3KN83 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 U82695.1-201ENST00000635752 1889 ntBASIC21.88■■□□□ 1.09
SBNO1A3KN83 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SBNO1A3KN83 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.88■■□□□ 1.09
SBNO1A3KN83 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 MIR1247-201ENST00000408206 136 ntBASIC21.87■■□□□ 1.09
SBNO1A3KN83 AC074338.1-201ENST00000416825 156 ntBASIC21.87■■□□□ 1.09
SBNO1A3KN83 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 FAM86LP-201ENST00000478302 853 ntBASIC21.87■■□□□ 1.09
SBNO1A3KN83 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SBNO1A3KN83 PTP4A1P2-201ENST00000546033 454 ntBASIC21.87■■□□□ 1.09
SBNO1A3KN83 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.87■■□□□ 1.09
SBNO1A3KN83 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SBNO1A3KN83 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.86■■□□□ 1.09
SBNO1A3KN83 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SBNO1A3KN83 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.86■■□□□ 1.09
SBNO1A3KN83 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SBNO1A3KN83 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.86■■□□□ 1.09
SBNO1A3KN83 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SBNO1A3KN83 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SBNO1A3KN83 GGT3P-204ENST00000453783 1664 ntBASIC21.86■■□□□ 1.09
SBNO1A3KN83 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms