Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 TIMM8BP1-201ENST00000452384 211 ntBASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC098859.1-201ENST00000502915 1238 ntBASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 KRT8P48-201ENST00000515599 1220 ntBASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 IGHV3-62-201ENST00000520057 340 ntBASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC092865.5-201ENST00000545435 363 ntBASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 MIR4469-201ENST00000583919 79 ntBASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC196A0A1B0GTZ2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL596087.1-201ENST00000400979 1969 ntBASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC196A0A1B0GTZ2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC008894.3-201ENST00000624324 3103 ntBASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 SPCS2P4-201ENST00000436160 681 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms