Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
R3HCC1Q9Y3T6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
R3HCC1Q9Y3T6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
R3HCC1Q9Y3T6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AKR1C7P-201ENST00000305623 895 ntBASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AL020989.1-201ENST00000422979 469 ntBASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AC073648.2-201ENST00000510116 352 ntBASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AC019129.2-201ENST00000609837 1235 ntBASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AL139288.1-201ENST00000623748 933 ntBASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HCC1Q9Y3T6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 SIGLEC30P-201ENST00000455569 941 ntBASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AL365209.1-201ENST00000624418 6473 ntBASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 AC022532.1-201ENST00000624563 1728 ntBASIC18.88■□□□□ 0.61
R3HCC1Q9Y3T6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms