Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC23.95■■□□□ 1.43
SHANK2Q9UPX8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SHANK2Q9UPX8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SHANK2Q9UPX8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 NME4-207ENST00000450036 985 ntTSL 3 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 AP005482.1-201ENST00000563722 1273 ntBASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 AC000095.1-201ENST00000603208 874 ntBASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHANK2Q9UPX8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 AC234783.1-201ENST00000441761 496 ntBASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 KRT8P44-201ENST00000441609 1350 ntBASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SHANK2Q9UPX8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 AC097359.3-201ENST00000603982 1210 ntBASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHANK2Q9UPX8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC23.92■■□□□ 1.42
SHANK2Q9UPX8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms