Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 MTHFR-217ENST00000641820 1569 ntBASIC17.46■□□□□ 0.39
SIX4Q9UIU6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 AL353705.2-201ENST00000428243 662 ntBASIC17.46■□□□□ 0.39
SIX4Q9UIU6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 AC125807.1-201ENST00000483097 614 ntBASIC17.46■□□□□ 0.39
SIX4Q9UIU6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 AC067863.1-201ENST00000494933 530 ntBASIC17.46■□□□□ 0.39
SIX4Q9UIU6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 AL390955.2-201ENST00000603032 514 ntBASIC17.46■□□□□ 0.39
SIX4Q9UIU6 AL133215.2-201ENST00000609242 977 ntBASIC17.46■□□□□ 0.39
SIX4Q9UIU6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SIX4Q9UIU6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SIX4Q9UIU6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SIX4Q9UIU6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX4Q9UIU6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 AC107890.1-201ENST00000422478 521 ntBASIC17.44■□□□□ 0.38
SIX4Q9UIU6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 AC140878.1-201ENST00000565277 250 ntBASIC17.44■□□□□ 0.38
SIX4Q9UIU6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms