Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL928711.1-201ENST00000570165 459 ntBASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 MIR4492-201ENST00000581627 80 ntBASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AL645728.2-201ENST00000641974 660 ntBASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 HCG4-201ENST00000418983 998 ntBASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 AC010327.4-202ENST00000591484 748 ntBASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 MTDHP5-201ENST00000598980 586 ntBASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 AL365203.3-201ENST00000609742 2057 ntBASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 AC092919.2-201ENST00000623631 1645 ntBASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.78■□□□□ 0.12
NECTIN3Q9NQS3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 KRT18P13-201ENST00000400056 1290 ntBASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 AC087641.1-201ENST00000557561 1021 ntBASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.77■□□□□ 0.12
NECTIN3Q9NQS3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 PAUPAR-201ENST00000630360 2965 ntBASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NECTIN3Q9NQS3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.76■□□□□ 0.11
NECTIN3Q9NQS3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms