Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 AC005912.2-201ENST00000619492 2400 ntBASIC19.52■□□□□ 0.71
RTN4Q9NQC3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RTN4Q9NQC3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 CR383656.2-201ENST00000548656 2254 ntBASIC19.51■□□□□ 0.71
RTN4Q9NQC3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 HMGA1P5-201ENST00000412453 271 ntBASIC19.51■□□□□ 0.71
RTN4Q9NQC3 CT45A11P-201ENST00000448043 1134 ntBASIC19.51■□□□□ 0.71
RTN4Q9NQC3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC19.51■□□□□ 0.71
RTN4Q9NQC3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 DGCR9-201ENST00000609630 2415 ntBASIC19.5■□□□□ 0.71
RTN4Q9NQC3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 KRT18P65-201ENST00000439811 1286 ntBASIC19.5■□□□□ 0.71
RTN4Q9NQC3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 NAPSB-206ENST00000562112 1266 ntBASIC19.5■□□□□ 0.71
RTN4Q9NQC3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 RN7SL279P-201ENST00000582185 284 ntBASIC19.5■□□□□ 0.71
RTN4Q9NQC3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.5■□□□□ 0.71
RTN4Q9NQC3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms