Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 HIST3H2BA-201ENST00000436555 524 ntBASIC18.22■□□□□ 0.51
VTA1Q9NP79 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 AC007274.1-201ENST00000439805 662 ntBASIC18.21■□□□□ 0.51
VTA1Q9NP79 MYCLP2-201ENST00000449268 967 ntBASIC18.21■□□□□ 0.51
VTA1Q9NP79 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 RRP7BP-205ENST00000566851 833 ntBASIC18.21■□□□□ 0.51
VTA1Q9NP79 AC132938.2-201ENST00000579188 680 ntBASIC18.21■□□□□ 0.51
VTA1Q9NP79 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 AL591163.1-201ENST00000641757 987 ntBASIC18.21■□□□□ 0.51
VTA1Q9NP79 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.21■□□□□ 0.51
VTA1Q9NP79 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTA1Q9NP79 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
VTA1Q9NP79 AC005332.8-201ENST00000622750 2735 ntBASIC18.21■□□□□ 0.5
VTA1Q9NP79 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 AP001094.4-201ENST00000579008 2176 ntBASIC18.2■□□□□ 0.5
VTA1Q9NP79 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms