Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.7■□□□□ 0.1
BRF2Q9HAW0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC016027.1-202ENST00000607927 1699 ntBASIC15.7■□□□□ 0.1
BRF2Q9HAW0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 FER1L4-210ENST00000615531 5998 ntBASIC15.7■□□□□ 0.1
BRF2Q9HAW0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AL590627.1-203ENST00000421194 1026 ntBASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC007967.2-201ENST00000432613 625 ntBASIC15.7■□□□□ 0.1
BRF2Q9HAW0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC068137.2-201ENST00000605408 478 ntBASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AL365330.1-201ENST00000607459 531 ntBASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 WASH6P-202ENST00000359512 1437 ntBASIC15.69■□□□□ 0.1
BRF2Q9HAW0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 CDC14C-201ENST00000428251 1719 ntBASIC15.69■□□□□ 0.1
BRF2Q9HAW0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 AC245100.5-201ENST00000452108 331 ntBASIC15.69■□□□□ 0.1
BRF2Q9HAW0 AC074386.1-202ENST00000463561 864 ntBASIC15.69■□□□□ 0.1
BRF2Q9HAW0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.69■□□□□ 0.1
BRF2Q9HAW0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC069224.1-201ENST00000566372 1715 ntBASIC15.68■□□□□ 0.1
BRF2Q9HAW0 LINC02447-202ENST00000501888 2146 ntBASIC15.68■□□□□ 0.1
BRF2Q9HAW0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC073439.1-201ENST00000624121 1774 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms