Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RARRES2P9-201ENST00000565168 469 ntBASIC13.37□□□□□ -0.27
ZNF48Q96MX3 AC073389.1-201ENST00000595595 795 ntBASIC13.37□□□□□ -0.27
ZNF48Q96MX3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 AC018529.1-201ENST00000613063 361 ntBASIC13.37□□□□□ -0.27
ZNF48Q96MX3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 FOXO1B-201ENST00000504678 1527 ntBASIC13.37□□□□□ -0.27
ZNF48Q96MX3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 AC004890.2-204ENST00000481968 304 ntBASIC13.36□□□□□ -0.27
ZNF48Q96MX3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.36□□□□□ -0.27
ZNF48Q96MX3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF48Q96MX3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AL118508.1-201ENST00000613502 2345 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 MRPS18AP1-201ENST00000414458 589 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AC241585.1-201ENST00000433527 519 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AC027369.6-201ENST00000525520 931 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AC003101.2-201ENST00000612557 442 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 SPDYE12P-201ENST00000618416 771 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AC073592.8-201ENST00000624126 511 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 AC100757.3-201ENST00000622361 1406 ntBASIC13.35□□□□□ -0.27
ZNF48Q96MX3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ZNF48Q96MX3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms