Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 SLC25A6P2-201ENST00000497974 877 ntBASIC15.84■□□□□ 0.13
VPS33AQ96AX1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 AC091167.2-201ENST00000579581 588 ntBASIC15.84■□□□□ 0.13
VPS33AQ96AX1 MTDHP3-201ENST00000594186 672 ntBASIC15.84■□□□□ 0.13
VPS33AQ96AX1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 LINC01144-201ENST00000626198 1710 ntBASIC15.84■□□□□ 0.13
VPS33AQ96AX1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.84■□□□□ 0.13
VPS33AQ96AX1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 LINC02447-202ENST00000501888 2146 ntBASIC15.83■□□□□ 0.13
VPS33AQ96AX1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.83■□□□□ 0.13
VPS33AQ96AX1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 CDC14C-201ENST00000428251 1719 ntBASIC15.83■□□□□ 0.13
VPS33AQ96AX1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
VPS33AQ96AX1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 RBM17P3-201ENST00000417687 1192 ntBASIC15.83■□□□□ 0.12
VPS33AQ96AX1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 POU5F1P6-201ENST00000466990 990 ntBASIC15.83■□□□□ 0.12
VPS33AQ96AX1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 AC139887.3-201ENST00000568585 713 ntBASIC15.83■□□□□ 0.12
VPS33AQ96AX1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VPS33AQ96AX1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 SART3-203ENST00000546611 1184 ntBASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms