Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC17A8Q8NDX2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 AL603756.1-201ENST00000606511 2163 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 RNU1-129P-201ENST00000384064 167 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SPDYE7P-202ENST00000420373 878 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 ACTBP11-201ENST00000436287 1126 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 RN7SL752P-201ENST00000463779 287 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 AC109635.5-201ENST00000533593 962 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 AC132938.2-201ENST00000579188 680 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 U1.21-201ENST00000580816 167 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 MIR4259-201ENST00000584466 101 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 AL591163.1-201ENST00000641757 987 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SNX33P1-201ENST00000592116 1762 ntBASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC17A8Q8NDX2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 AC140658.5-201ENST00000438532 169 ntBASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 SPTLC1P1-201ENST00000447199 261 ntBASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 RHOQP1-201ENST00000555758 579 ntBASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 AL031055.1-201ENST00000606362 631 ntBASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC17A8Q8NDX2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SLC17A8Q8NDX2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms