Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 AL353779.1-201ENST00000434793 351 ntBASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 AC135586.1-201ENST00000539323 574 ntBASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 AC140912.1-201ENST00000577171 1054 ntBASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 AL359881.2-201ENST00000602973 570 ntBASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 KRT8P39-201ENST00000396270 1433 ntBASIC17.64■□□□□ 0.41
COLGALT1Q8NBJ5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 SNX33P1-201ENST00000592116 1762 ntBASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 AC084018.2-201ENST00000613093 2607 ntBASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 AC005915.1-201ENST00000624912 2018 ntBASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 OR6D1P-203ENST00000641209 4860 ntBASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLGALT1Q8NBJ5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 AC105020.1-201ENST00000435356 2205 ntBASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 AC092068.3-201ENST00000587894 2016 ntBASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.62■□□□□ 0.41
COLGALT1Q8NBJ5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLGALT1Q8NBJ5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms