Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 GGT4P-201ENST00000623672 1708 ntBASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
NPAS3Q8IXF0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
NPAS3Q8IXF0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AL589987.1-201ENST00000453380 819 ntBASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AC023310.3-201ENST00000557027 670 ntBASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AC100756.1-201ENST00000562736 682 ntBASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AC138749.3-201ENST00000567691 622 ntBASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AC017083.2-201ENST00000608069 979 ntBASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 AC116165.1-201ENST00000611806 668 ntBASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 MIR6069-201ENST00000620069 79 ntBASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPAS3Q8IXF0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 MEP1AP4-201ENST00000423244 1087 ntBASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 AL139010.1-201ENST00000454878 894 ntBASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 ACA64.2-201ENST00000459014 129 ntBASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 AC099568.2-201ENST00000609194 695 ntBASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPAS3Q8IXF0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 MYCLP2-201ENST00000449268 967 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms