Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 AC015936.2-201ENST00000593177 259 ntBASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 ELK2AP-201ENST00000392510 1007 ntBASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AP002490.2-201ENST00000524791 560 ntBASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AC093726.1-201ENST00000608064 963 ntBASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.86■□□□□ 0.61
OTOP1Q7RTM1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 RNA5SP410-201ENST00000516285 106 ntBASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
OTOP1Q7RTM1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
OTOP1Q7RTM1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.84■□□□□ 0.61
OTOP1Q7RTM1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
OTOP1Q7RTM1 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
OTOP1Q7RTM1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms