Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 INTS4P1-201ENST00000438455 1935 ntBASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 MED15P5-201ENST00000423150 992 ntBASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 SART3-203ENST00000546611 1184 ntBASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 ME2P1-201ENST00000426028 1970 ntBASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 OR7E14P-202ENST00000530490 1290 ntBASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 AC009154.2-201ENST00000621177 724 ntBASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 AP005117.1-201ENST00000584346 1413 ntBASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXR1Q6PIV2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 RPS8P6-201ENST00000426177 609 ntBASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 AC005104.2-201ENST00000427818 678 ntBASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 AL356488.2-201ENST00000602755 427 ntBASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 AC140113.2-201ENST00000604370 208 ntBASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 AC079781.5-202ENST00000641784 3743 ntBASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms