Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 AL512604.3-201ENST00000569583 964 ntBASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 AP005242.2-201ENST00000580065 1175 ntBASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP4Q6PIL6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 MIR4674-201ENST00000582457 87 ntBASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 CDC14C-201ENST00000428251 1719 ntBASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 LINC00528-201ENST00000600723 2160 ntBASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 AC097637.2-201ENST00000624096 1997 ntBASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
KCNIP4Q6PIL6 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms