Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 MIR1202-201ENST00000408529 83 ntBASIC15.7■□□□□ 0.1
RIF1Q5UIP0 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.7■□□□□ 0.1
RIF1Q5UIP0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 AC132192.2-201ENST00000596206 1147 ntBASIC15.7■□□□□ 0.1
RIF1Q5UIP0 COX6A1P2-201ENST00000620597 330 ntBASIC15.7■□□□□ 0.1
RIF1Q5UIP0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.7■□□□□ 0.1
RIF1Q5UIP0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 INTS4P2-202ENST00000614726 2019 ntBASIC15.69■□□□□ 0.1
RIF1Q5UIP0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 AC005357.2-202ENST00000590507 1060 ntBASIC15.69■□□□□ 0.1
RIF1Q5UIP0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 AC011491.1-203ENST00000637688 543 ntBASIC15.69■□□□□ 0.1
RIF1Q5UIP0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 IMP3P2-201ENST00000489760 475 ntBASIC15.69■□□□□ 0.1
RIF1Q5UIP0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIF1Q5UIP0 AC108860.2-201ENST00000562760 2183 ntBASIC15.69■□□□□ 0.1
RIF1Q5UIP0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 SERPINA13P-202ENST00000478994 924 ntBASIC15.68■□□□□ 0.1
RIF1Q5UIP0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RIF1Q5UIP0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms