Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 GGT3P-204ENST00000453783 1664 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 GNAQP1-201ENST00000444815 1067 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 AL596325.1-201ENST00000563991 1082 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 AC004790.1-201ENST00000612686 536 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 HLA-A-202ENST00000376806 1854 ntBASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.72□□□□□ -0.05
RNFT1Q5M7Z0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 AC135586.1-201ENST00000539323 574 ntBASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 AC044860.1-202ENST00000559481 777 ntBASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNFT1Q5M7Z0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RNFT1Q5M7Z0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 NFIC-211ENST00000641145 8399 ntBASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 RN7SL618P-201ENST00000477850 296 ntBASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 ZNF890P-202ENST00000530367 1156 ntBASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms