Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL16A1Q07092 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COL16A1Q07092 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL16A1Q07092 PARVG-202ENST00000415224 999 ntTSL 2 BASIC21.6■■□□□ 1.05
COL16A1Q07092 RPL13AP19-201ENST00000434320 584 ntBASIC21.6■■□□□ 1.05
COL16A1Q07092 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC21.6■■□□□ 1.05
COL16A1Q07092 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.6■■□□□ 1.05
COL16A1Q07092 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.6■■□□□ 1.05
COL16A1Q07092 AC022217.1-201ENST00000521069 738 ntBASIC21.6■■□□□ 1.05
COL16A1Q07092 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC21.6■■□□□ 1.05
COL16A1Q07092 AF254983.2-201ENST00000612331 135 ntBASIC21.6■■□□□ 1.05
COL16A1Q07092 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC21.6■■□□□ 1.05
COL16A1Q07092 U82695.1-201ENST00000635752 1889 ntBASIC21.6■■□□□ 1.05
COL16A1Q07092 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
COL16A1Q07092 BX323043.1-201ENST00000641006 1765 ntBASIC21.6■■□□□ 1.05
COL16A1Q07092 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL16A1Q07092 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL16A1Q07092 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.6■■□□□ 1.05
COL16A1Q07092 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COL16A1Q07092 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 ACKR1-201ENST00000368121 1240 ntBASIC21.59■■□□□ 1.05
COL16A1Q07092 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.59■■□□□ 1.05
COL16A1Q07092 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.59■■□□□ 1.05
COL16A1Q07092 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 AL133466.1-201ENST00000447582 150 ntBASIC21.59■■□□□ 1.05
COL16A1Q07092 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.59■■□□□ 1.05
COL16A1Q07092 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC21.59■■□□□ 1.05
COL16A1Q07092 KSR1-207ENST00000578981 748 ntTSL 4 BASIC21.59■■□□□ 1.05
COL16A1Q07092 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.59■■□□□ 1.05
COL16A1Q07092 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.59■■□□□ 1.05
COL16A1Q07092 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
COL16A1Q07092 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.59■■□□□ 1.05
COL16A1Q07092 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.59■■□□□ 1.05
COL16A1Q07092 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
COL16A1Q07092 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
COL16A1Q07092 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL16A1Q07092 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.58■■□□□ 1.05
COL16A1Q07092 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.58■■□□□ 1.05
COL16A1Q07092 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC21.58■■□□□ 1.05
COL16A1Q07092 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC21.58■■□□□ 1.05
COL16A1Q07092 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL16A1Q07092 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC21.58■■□□□ 1.05
COL16A1Q07092 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC21.58■■□□□ 1.05
COL16A1Q07092 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL16A1Q07092 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC21.58■■□□□ 1.05
COL16A1Q07092 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.58■■□□□ 1.05
COL16A1Q07092 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.58■■□□□ 1.05
COL16A1Q07092 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL16A1Q07092 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.58■■□□□ 1.05
COL16A1Q07092 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.58■■□□□ 1.05
COL16A1Q07092 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL16A1Q07092 AL023775.1-201ENST00000454907 1746 ntBASIC21.58■■□□□ 1.05
COL16A1Q07092 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.58■■□□□ 1.05
COL16A1Q07092 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL16A1Q07092 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC21.58■■□□□ 1.04
COL16A1Q07092 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC21.58■■□□□ 1.04
COL16A1Q07092 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.58■■□□□ 1.04
COL16A1Q07092 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.58■■□□□ 1.04
COL16A1Q07092 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL16A1Q07092 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC21.58■■□□□ 1.04
COL16A1Q07092 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
COL16A1Q07092 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC21.58■■□□□ 1.04
COL16A1Q07092 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC21.58■■□□□ 1.04
COL16A1Q07092 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC21.58■■□□□ 1.04
COL16A1Q07092 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL16A1Q07092 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL16A1Q07092 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL16A1Q07092 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC21.58■■□□□ 1.04
COL16A1Q07092 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 AC104581.1-202ENST00000635932 2618 ntBASIC21.57■■□□□ 1.04
COL16A1Q07092 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
COL16A1Q07092 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.57■■□□□ 1.04
COL16A1Q07092 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.57■■□□□ 1.04
COL16A1Q07092 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL16A1Q07092 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC21.57■■□□□ 1.04
COL16A1Q07092 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC21.57■■□□□ 1.04
COL16A1Q07092 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.57■■□□□ 1.04
COL16A1Q07092 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC21.57■■□□□ 1.04
COL16A1Q07092 AC015910.1-201ENST00000579400 975 ntBASIC21.57■■□□□ 1.04
COL16A1Q07092 ECM1P1-201ENST00000604092 1279 ntBASIC21.57■■□□□ 1.04
COL16A1Q07092 AL645939.5-201ENST00000606834 243 ntBASIC21.57■■□□□ 1.04
COL16A1Q07092 AC145423.3-201ENST00000615987 467 ntBASIC21.57■■□□□ 1.04
COL16A1Q07092 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC21.57■■□□□ 1.04
COL16A1Q07092 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms