Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 MIR663A-201ENST00000385250 93 ntBASIC17.2■□□□□ 0.34
CBX1P83916 AC004951.3-201ENST00000418645 1148 ntBASIC17.2■□□□□ 0.34
CBX1P83916 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX1P83916 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.2■□□□□ 0.34
CBX1P83916 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CBX1P83916 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX1P83916 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CBX1P83916 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 AC136759.1-202ENST00000530858 2194 ntBASIC17.2■□□□□ 0.34
CBX1P83916 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 TCAF1P1-201ENST00000414990 2232 ntBASIC17.2■□□□□ 0.34
CBX1P83916 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 AC148477.4-201ENST00000613430 1793 ntBASIC17.2■□□□□ 0.34
CBX1P83916 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CBX1P83916 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBX1P83916 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CBX1P83916 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX1P83916 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBX1P83916 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX1P83916 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.19■□□□□ 0.34
CBX1P83916 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.19■□□□□ 0.34
CBX1P83916 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.19■□□□□ 0.34
CBX1P83916 AC073111.5-205ENST00000641717 521 ntBASIC17.19■□□□□ 0.34
CBX1P83916 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CBX1P83916 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX1P83916 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX1P83916 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CBX1P83916 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CBX1P83916 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX1P83916 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX1P83916 AC089987.1-201ENST00000551654 2209 ntBASIC17.19■□□□□ 0.34
CBX1P83916 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX1P83916 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CBX1P83916 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX1P83916 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CBX1P83916 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CBX1P83916 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CBX1P83916 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX1P83916 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CBX1P83916 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CBX1P83916 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX1P83916 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX1P83916 PRKY-204ENST00000533551 1019 ntBASIC17.18■□□□□ 0.34
CBX1P83916 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX1P83916 AC080038.1-201ENST00000611274 1154 ntBASIC17.18■□□□□ 0.34
CBX1P83916 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX1P83916 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX1P83916 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms