Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RBM17P1-201ENST00000453646 1190 ntBASIC14.78□□□□□ -0.04
VBP1P61758 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.78□□□□□ -0.04
VBP1P61758 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
VBP1P61758 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.78□□□□□ -0.04
VBP1P61758 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.77□□□□□ -0.04
VBP1P61758 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 AC005840.4-201ENST00000541242 2494 ntBASIC14.77□□□□□ -0.04
VBP1P61758 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.77□□□□□ -0.04
VBP1P61758 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.77□□□□□ -0.04
VBP1P61758 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.77□□□□□ -0.04
VBP1P61758 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.77□□□□□ -0.04
VBP1P61758 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.77□□□□□ -0.04
VBP1P61758 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VBP1P61758 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.77□□□□□ -0.04
VBP1P61758 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.77□□□□□ -0.05
VBP1P61758 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VBP1P61758 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.77□□□□□ -0.05
VBP1P61758 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
VBP1P61758 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.77□□□□□ -0.05
VBP1P61758 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.77□□□□□ -0.05
VBP1P61758 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.77□□□□□ -0.05
VBP1P61758 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.77□□□□□ -0.05
VBP1P61758 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.77□□□□□ -0.05
VBP1P61758 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
VBP1P61758 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
VBP1P61758 AL359736.2-201ENST00000621992 437 ntBASIC14.77□□□□□ -0.05
VBP1P61758 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.77□□□□□ -0.05
VBP1P61758 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
VBP1P61758 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.77□□□□□ -0.05
VBP1P61758 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
VBP1P61758 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.77□□□□□ -0.05
VBP1P61758 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VBP1P61758 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.76□□□□□ -0.05
VBP1P61758 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 AC091951.1-201ENST00000512854 2465 ntBASIC14.76□□□□□ -0.05
VBP1P61758 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
VBP1P61758 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VBP1P61758 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.76□□□□□ -0.05
VBP1P61758 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
VBP1P61758 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
VBP1P61758 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.76□□□□□ -0.05
VBP1P61758 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 TSPY14P-201ENST00000303979 915 ntBASIC14.76□□□□□ -0.05
VBP1P61758 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VBP1P61758 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
VBP1P61758 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.76□□□□□ -0.05
VBP1P61758 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.76□□□□□ -0.05
VBP1P61758 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.76□□□□□ -0.05
VBP1P61758 POU5F1P6-201ENST00000466990 990 ntBASIC14.76□□□□□ -0.05
VBP1P61758 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.76□□□□□ -0.05
VBP1P61758 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VBP1P61758 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.76□□□□□ -0.05
VBP1P61758 FITM1-202ENST00000559294 800 ntBASIC14.76□□□□□ -0.05
VBP1P61758 AL512604.3-201ENST00000569583 964 ntBASIC14.76□□□□□ -0.05
VBP1P61758 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.76□□□□□ -0.05
VBP1P61758 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms