Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LINC01144-201ENST00000626198 1710 ntBASIC12.03□□□□□ -0.48
APOC4P55056 AL031731.1-201ENST00000642131 2094 ntBASIC12.02□□□□□ -0.48
APOC4P55056 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC4P55056 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC4P55056 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.02□□□□□ -0.48
APOC4P55056 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
APOC4P55056 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC4P55056 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC4P55056 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
APOC4P55056 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.02□□□□□ -0.48
APOC4P55056 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
APOC4P55056 PCGF3-213ENST00000620529 1899 ntBASIC12.02□□□□□ -0.48
APOC4P55056 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
APOC4P55056 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC4P55056 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
APOC4P55056 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
APOC4P55056 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.02□□□□□ -0.49
APOC4P55056 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC4P55056 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.02□□□□□ -0.49
APOC4P55056 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC4P55056 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC4P55056 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.02□□□□□ -0.49
APOC4P55056 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.02□□□□□ -0.49
APOC4P55056 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC4P55056 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC4P55056 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.02□□□□□ -0.49
APOC4P55056 MIR4453-201ENST00000584019 89 ntBASIC12.02□□□□□ -0.49
APOC4P55056 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC4P55056 AC007967.4-201ENST00000614700 386 ntBASIC12.02□□□□□ -0.49
APOC4P55056 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.02□□□□□ -0.49
APOC4P55056 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC4P55056 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
APOC4P55056 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 LETM1P2-201ENST00000597330 2178 ntBASIC12.02□□□□□ -0.49
APOC4P55056 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC4P55056 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
APOC4P55056 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC4P55056 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 AC005915.1-201ENST00000624912 2018 ntBASIC12.01□□□□□ -0.49
APOC4P55056 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC4P55056 AL603756.1-201ENST00000606511 2163 ntBASIC12.01□□□□□ -0.49
APOC4P55056 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC4P55056 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC4P55056 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.01□□□□□ -0.49
APOC4P55056 AC055876.3-201ENST00000431496 288 ntBASIC12.01□□□□□ -0.49
APOC4P55056 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC4P55056 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC4P55056 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 AC093724.1-201ENST00000448659 1027 ntBASIC12.01□□□□□ -0.49
APOC4P55056 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 INGX-202ENST00000489074 768 ntBASIC12.01□□□□□ -0.49
APOC4P55056 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC4P55056 DUX4L27-201ENST00000554796 1261 ntBASIC12.01□□□□□ -0.49
APOC4P55056 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms