Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF4P48230 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF4P48230 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TM4SF4P48230 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF4P48230 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF4P48230 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF4P48230 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF4P48230 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TM4SF4P48230 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TM4SF4P48230 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
TM4SF4P48230 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TM4SF4P48230 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
TM4SF4P48230 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF4P48230 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TM4SF4P48230 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TM4SF4P48230 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF4P48230 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF4P48230 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.39■□□□□ 0.53
TM4SF4P48230 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.39■□□□□ 0.53
TM4SF4P48230 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF4P48230 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.39■□□□□ 0.53
TM4SF4P48230 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF4P48230 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
TM4SF4P48230 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF4P48230 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF4P48230 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF4P48230 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF4P48230 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TM4SF4P48230 AL645728.1-201ENST00000366221 2101 ntBASIC18.38■□□□□ 0.53
TM4SF4P48230 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TM4SF4P48230 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TM4SF4P48230 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 KRT18P64-201ENST00000434946 1219 ntBASIC18.38■□□□□ 0.53
TM4SF4P48230 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF4P48230 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.38■□□□□ 0.53
TM4SF4P48230 HIST2H2BC-201ENST00000498492 580 ntBASIC18.38■□□□□ 0.53
TM4SF4P48230 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.38■□□□□ 0.53
TM4SF4P48230 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.38■□□□□ 0.53
TM4SF4P48230 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
TM4SF4P48230 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.38■□□□□ 0.53
TM4SF4P48230 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF4P48230 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.38■□□□□ 0.53
TM4SF4P48230 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TM4SF4P48230 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TM4SF4P48230 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF4P48230 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF4P48230 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TM4SF4P48230 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TM4SF4P48230 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.37■□□□□ 0.53
TM4SF4P48230 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TM4SF4P48230 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF4P48230 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
TM4SF4P48230 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF4P48230 CHMP4BP1-201ENST00000556017 588 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms