Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCLP35914 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGCLP35914 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCLP35914 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGCLP35914 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGCLP35914 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGCLP35914 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HMGCLP35914 AC093520.2-201ENST00000561830 333 ntBASIC16.32■□□□□ 0.2
HMGCLP35914 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.32■□□□□ 0.2
HMGCLP35914 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGCLP35914 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGCLP35914 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HMGCLP35914 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGCLP35914 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCLP35914 AC079781.4-201ENST00000641908 219 ntBASIC16.32■□□□□ 0.2
HMGCLP35914 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HMGCLP35914 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 FAM220BP-201ENST00000377689 816 ntBASIC16.31■□□□□ 0.2
HMGCLP35914 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 CNN2P11-201ENST00000429351 262 ntBASIC16.31■□□□□ 0.2
HMGCLP35914 DNAJB3-202ENST00000449667 1266 ntBASIC16.31■□□□□ 0.2
HMGCLP35914 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 SLC25A39P2-201ENST00000537614 270 ntBASIC16.31■□□□□ 0.2
HMGCLP35914 SNHG9-202ENST00000564014 471 ntBASIC16.31■□□□□ 0.2
HMGCLP35914 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.31■□□□□ 0.2
HMGCLP35914 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGCLP35914 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
HMGCLP35914 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMGCLP35914 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMGCLP35914 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGCLP35914 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HMGCLP35914 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.31■□□□□ 0.2
HMGCLP35914 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMGCLP35914 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 AC046158.3-201ENST00000624947 2558 ntBASIC16.31■□□□□ 0.2
HMGCLP35914 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCLP35914 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HMGCLP35914 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGCLP35914 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.3■□□□□ 0.2
HMGCLP35914 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.3■□□□□ 0.2
HMGCLP35914 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGCLP35914 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGCLP35914 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
HMGCLP35914 KRT18P32-201ENST00000424695 1287 ntBASIC16.3■□□□□ 0.2
HMGCLP35914 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.3■□□□□ 0.2
HMGCLP35914 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.3■□□□□ 0.2
HMGCLP35914 AC024267.1-201ENST00000582320 895 ntBASIC16.3■□□□□ 0.2
HMGCLP35914 AC009093.7-201ENST00000623853 1223 ntBASIC16.3■□□□□ 0.2
HMGCLP35914 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.3■□□□□ 0.2
HMGCLP35914 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 AL391005.1-201ENST00000623953 2435 ntBASIC16.3■□□□□ 0.2
HMGCLP35914 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
HMGCLP35914 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms