Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.03■□□□□ 0.16
EPHA3P29320 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.03■□□□□ 0.16
EPHA3P29320 PTCHD3P3-201ENST00000403073 906 ntBASIC16.03■□□□□ 0.16
EPHA3P29320 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.03■□□□□ 0.16
EPHA3P29320 KRT16P4-201ENST00000453883 522 ntBASIC16.03■□□□□ 0.16
EPHA3P29320 AL049597.2-201ENST00000565575 961 ntBASIC16.03■□□□□ 0.16
EPHA3P29320 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.03■□□□□ 0.16
EPHA3P29320 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.03■□□□□ 0.16
EPHA3P29320 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.03■□□□□ 0.16
EPHA3P29320 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
EPHA3P29320 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.03■□□□□ 0.16
EPHA3P29320 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EPHA3P29320 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.03■□□□□ 0.16
EPHA3P29320 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.03■□□□□ 0.16
EPHA3P29320 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.03■□□□□ 0.16
EPHA3P29320 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
EPHA3P29320 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.03■□□□□ 0.16
EPHA3P29320 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.03■□□□□ 0.16
EPHA3P29320 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
EPHA3P29320 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.02■□□□□ 0.16
EPHA3P29320 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
EPHA3P29320 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
EPHA3P29320 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.02■□□□□ 0.16
EPHA3P29320 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.02■□□□□ 0.16
EPHA3P29320 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.02■□□□□ 0.16
EPHA3P29320 AC092119.3-201ENST00000612618 583 ntBASIC16.02■□□□□ 0.16
EPHA3P29320 AF228730.7-201ENST00000641842 219 ntBASIC16.02■□□□□ 0.16
EPHA3P29320 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA3P29320 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
EPHA3P29320 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
EPHA3P29320 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
EPHA3P29320 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.02■□□□□ 0.15
EPHA3P29320 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.02■□□□□ 0.15
EPHA3P29320 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.02■□□□□ 0.15
EPHA3P29320 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.02■□□□□ 0.15
EPHA3P29320 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA3P29320 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
EPHA3P29320 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA3P29320 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
EPHA3P29320 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.01■□□□□ 0.15
EPHA3P29320 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA3P29320 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
EPHA3P29320 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.01■□□□□ 0.15
EPHA3P29320 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.01■□□□□ 0.15
EPHA3P29320 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.01■□□□□ 0.15
EPHA3P29320 AC107918.2-201ENST00000530817 355 ntBASIC16.01■□□□□ 0.15
EPHA3P29320 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 AC139887.3-201ENST00000568585 713 ntBASIC16.01■□□□□ 0.15
EPHA3P29320 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.01■□□□□ 0.15
EPHA3P29320 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.01■□□□□ 0.15
EPHA3P29320 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.01■□□□□ 0.15
EPHA3P29320 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 AL353732.1-201ENST00000569618 1459 ntBASIC16.01■□□□□ 0.15
EPHA3P29320 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EPHA3P29320 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms