Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM1P09493 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.19■□□□□ 0.5
TPM1P09493 MPDU1-223ENST00000582151 728 ntBASIC18.19■□□□□ 0.5
TPM1P09493 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
TPM1P09493 AC092329.2-201ENST00000598402 547 ntBASIC18.19■□□□□ 0.5
TPM1P09493 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.19■□□□□ 0.5
TPM1P09493 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.19■□□□□ 0.5
TPM1P09493 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM1P09493 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM1P09493 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TPM1P09493 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM1P09493 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM1P09493 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM1P09493 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM1P09493 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TPM1P09493 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM1P09493 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TPM1P09493 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 PCGF3-213ENST00000620529 1899 ntBASIC18.18■□□□□ 0.5
TPM1P09493 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TPM1P09493 LINC01144-201ENST00000626198 1710 ntBASIC18.18■□□□□ 0.5
TPM1P09493 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM1P09493 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 SNX33P1-201ENST00000592116 1762 ntBASIC18.18■□□□□ 0.5
TPM1P09493 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 PRYP5-201ENST00000451909 266 ntBASIC18.18■□□□□ 0.5
TPM1P09493 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.18■□□□□ 0.5
TPM1P09493 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM1P09493 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.18■□□□□ 0.5
TPM1P09493 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TPM1P09493 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM1P09493 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM1P09493 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM1P09493 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM1P09493 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM1P09493 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 AC010491.1-201ENST00000563101 2797 ntBASIC18.17■□□□□ 0.5
TPM1P09493 LINC02228-204ENST00000642115 2962 ntBASIC18.17■□□□□ 0.5
TPM1P09493 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.17■□□□□ 0.5
TPM1P09493 TMPOP1-202ENST00000424642 1267 ntBASIC18.17■□□□□ 0.5
TPM1P09493 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TPM1P09493 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM1P09493 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TPM1P09493 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
TPM1P09493 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM1P09493 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.17■□□□□ 0.5
TPM1P09493 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM1P09493 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.16■□□□□ 0.5
TPM1P09493 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM1P09493 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TPM1P09493 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM1P09493 FAM45BP-202ENST00000592932 1624 ntBASIC18.16■□□□□ 0.5
TPM1P09493 MYO15B-237ENST00000642007 4893 ntBASIC18.16■□□□□ 0.5
TPM1P09493 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM1P09493 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.16■□□□□ 0.5
TPM1P09493 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM1P09493 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM1P09493 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM1P09493 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms