Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.37□□□□□ -0.11
SFTPBP07988 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.37□□□□□ -0.11
SFTPBP07988 SLC25A1P1-201ENST00000528351 927 ntBASIC14.37□□□□□ -0.11
SFTPBP07988 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPBP07988 AC139887.3-201ENST00000568585 713 ntBASIC14.37□□□□□ -0.11
SFTPBP07988 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.37□□□□□ -0.11
SFTPBP07988 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SFTPBP07988 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SFTPBP07988 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
SFTPBP07988 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SFTPBP07988 BX640515.1-201ENST00000617215 977 ntBASIC14.37□□□□□ -0.11
SFTPBP07988 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.37□□□□□ -0.11
SFTPBP07988 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.37□□□□□ -0.11
SFTPBP07988 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SFTPBP07988 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SFTPBP07988 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.37□□□□□ -0.11
SFTPBP07988 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SFTPBP07988 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.37□□□□□ -0.11
SFTPBP07988 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPBP07988 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPBP07988 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SFTPBP07988 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPBP07988 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPBP07988 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPBP07988 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.36□□□□□ -0.11
SFTPBP07988 AC012640.2-201ENST00000561606 901 ntBASIC14.36□□□□□ -0.11
SFTPBP07988 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPBP07988 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPBP07988 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPBP07988 AL139424.1-201ENST00000607572 797 ntBASIC14.36□□□□□ -0.11
SFTPBP07988 AL589182.2-201ENST00000619332 1049 ntBASIC14.36□□□□□ -0.11
SFTPBP07988 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPBP07988 AC116407.3-201ENST00000623905 1129 ntBASIC14.36□□□□□ -0.11
SFTPBP07988 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPBP07988 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPBP07988 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 AC022188.1-201ENST00000620960 1664 ntBASIC14.36□□□□□ -0.11
SFTPBP07988 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.36□□□□□ -0.11
SFTPBP07988 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPBP07988 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPBP07988 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPBP07988 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPBP07988 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.35□□□□□ -0.11
SFTPBP07988 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.35□□□□□ -0.11
SFTPBP07988 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPBP07988 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.35□□□□□ -0.11
SFTPBP07988 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPBP07988 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SFTPBP07988 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPBP07988 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
SFTPBP07988 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SFTPBP07988 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPBP07988 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms