Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CTSDP07339 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CTSDP07339 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSDP07339 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CTSDP07339 AL031133.1-201ENST00000406807 723 ntBASIC13.68□□□□□ -0.22
CTSDP07339 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSDP07339 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
CTSDP07339 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSDP07339 PRYP5-201ENST00000451909 266 ntBASIC13.68□□□□□ -0.22
CTSDP07339 KRT17P6-201ENST00000453795 1220 ntBASIC13.68□□□□□ -0.22
CTSDP07339 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSDP07339 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSDP07339 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSDP07339 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSDP07339 REXO1L3P-201ENST00000622202 1288 ntBASIC13.68□□□□□ -0.22
CTSDP07339 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 NSUN5P1-202ENST00000421140 1535 ntBASIC13.68□□□□□ -0.22
CTSDP07339 NSUN5P2-203ENST00000457352 1529 ntBASIC13.68□□□□□ -0.22
CTSDP07339 AL592424.1-201ENST00000563624 1536 ntBASIC13.68□□□□□ -0.22
CTSDP07339 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSDP07339 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CTSDP07339 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 TMBIM7P-203ENST00000641617 1718 ntBASIC13.67□□□□□ -0.22
CTSDP07339 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 POM121L3P-201ENST00000419331 1163 ntBASIC13.67□□□□□ -0.22
CTSDP07339 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.67□□□□□ -0.22
CTSDP07339 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
CTSDP07339 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.67□□□□□ -0.22
CTSDP07339 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CTSDP07339 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSDP07339 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CTSDP07339 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 AL121956.5-201ENST00000625261 221 ntBASIC13.67□□□□□ -0.22
CTSDP07339 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CTSDP07339 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 AC020658.6-201ENST00000623564 1870 ntBASIC13.67□□□□□ -0.22
CTSDP07339 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSDP07339 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSDP07339 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSDP07339 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms