Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.64■□□□□ 0.41
TUBB4AP04350 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TUBB4AP04350 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.64■□□□□ 0.41
TUBB4AP04350 LINC00982-205ENST00000420957 435 ntBASIC17.64■□□□□ 0.41
TUBB4AP04350 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.64■□□□□ 0.41
TUBB4AP04350 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.64■□□□□ 0.41
TUBB4AP04350 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.64■□□□□ 0.41
TUBB4AP04350 AL441883.1-201ENST00000566170 1045 ntBASIC17.64■□□□□ 0.41
TUBB4AP04350 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TUBB4AP04350 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBB4AP04350 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TUBB4AP04350 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBB4AP04350 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TUBB4AP04350 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TUBB4AP04350 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TUBB4AP04350 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
TUBB4AP04350 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBB4AP04350 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 AC246785.2-201ENST00000432512 513 ntBASIC17.63■□□□□ 0.41
TUBB4AP04350 RNF126P1-202ENST00000569893 925 ntBASIC17.63■□□□□ 0.41
TUBB4AP04350 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TUBB4AP04350 LINC00528-201ENST00000600723 2160 ntBASIC17.63■□□□□ 0.41
TUBB4AP04350 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 AC007191.1-201ENST00000623179 2995 ntBASIC17.63■□□□□ 0.41
TUBB4AP04350 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TUBB4AP04350 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBB4AP04350 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TUBB4AP04350 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TUBB4AP04350 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB4AP04350 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TUBB4AP04350 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB4AP04350 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 RCN1P1-201ENST00000400413 996 ntBASIC17.62■□□□□ 0.41
TUBB4AP04350 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.62■□□□□ 0.41
TUBB4AP04350 COX11P1-201ENST00000489116 835 ntBASIC17.62■□□□□ 0.41
TUBB4AP04350 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.62■□□□□ 0.41
TUBB4AP04350 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.62■□□□□ 0.41
TUBB4AP04350 AC091167.2-201ENST00000579581 588 ntBASIC17.62■□□□□ 0.41
TUBB4AP04350 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB4AP04350 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms