Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A1P02462 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A1P02462 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COL4A1P02462 AC007389.4-201ENST00000454674 793 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A1P02462 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A1P02462 AC092552.1-201ENST00000547243 906 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A1P02462 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
COL4A1P02462 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.75■□□□□ 0.75
COL4A1P02462 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A1P02462 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL4A1P02462 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 FO393414.2-201ENST00000405153 598 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 BNIP3P42-201ENST00000454982 569 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 AC124283.3-201ENST00000570869 594 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 BRI3BPP1-201ENST00000594224 787 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 BNIP3P29-201ENST00000598302 571 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 AC011447.5-201ENST00000616168 564 ntBASIC19.75■□□□□ 0.75
COL4A1P02462 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A1P02462 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A1P02462 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A1P02462 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A1P02462 AC134407.2-201ENST00000625089 1978 ntBASIC19.74■□□□□ 0.75
COL4A1P02462 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL4A1P02462 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A1P02462 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A1P02462 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A1P02462 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.74■□□□□ 0.75
COL4A1P02462 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.74■□□□□ 0.75
COL4A1P02462 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A1P02462 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A1P02462 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A1P02462 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL4A1P02462 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL4A1P02462 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A1P02462 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.73■□□□□ 0.75
COL4A1P02462 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.73■□□□□ 0.75
COL4A1P02462 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.73■□□□□ 0.75
COL4A1P02462 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.73■□□□□ 0.75
COL4A1P02462 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A1P02462 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.73■□□□□ 0.75
COL4A1P02462 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COL4A1P02462 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A1P02462 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A1P02462 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.72■□□□□ 0.75
COL4A1P02462 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A1P02462 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A1P02462 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A1P02462 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A1P02462 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL4A1P02462 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL4A1P02462 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 AC018665.1-201ENST00000622927 1362 ntBASIC19.72■□□□□ 0.75
COL4A1P02462 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A1P02462 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
COL4A1P02462 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A1P02462 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A1P02462 AC011495.1-201ENST00000498085 584 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms